Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MHKYKNIGYVASESPKSQEVSKLLQKLNFINITEENKSEVD-----LLVVVGGDGLMLHTLHNYVVGNKDIHVYGVNTGSVGFLMNKYFSSSEDLIDNIEHATSAQLT--LLKMEAIDLSGKK-YHHVAVNEVYVFRKANQIVEMNVAINSKLKMEKFRGDGIILSTPTGSTAYNFSAGGPILPLNSNLFALTSINSYYPRHWNGALISNDTIVQIDINNAQNRPALVVSDYKELHNISQIKMQKDHENTVTLLFDKDYSLDERIFDRQFLY |
| 3V80 Chain:A ((8-186)) | ---------------KGDEKSDLL-RLNMIAGFGEYDMEYDDVEPEIVISIGGDGTFLSAFHQYEERLDEIAFIGIHTGHLGFYADWRPAEADKLVKLLA---YQKVSYPLLKTTVKYG---KEATYLALNESTVKSSGGPFV-VDVVIND-IHFERFRGDGLCMSTPSGTTAYNKSLGGALMHPSIEAMQLTEMASINNRVYRTIGSPLVFPKHHVVSLQPVNDKDFQISVDHLSILHRDVQEIRYEVSAKKIHFARFRSFPFWRRVHDSF |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3V80.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -70272 for 1093 contacts (-64.3/contact) +
2D Compatibility (PS) -17943 + (NN) -4515 + (LL) 1152
1D Compatibility (HY) -11200 + (ID) 2850
Total energy: -105628.0 ( -96.64 by residue)
QMean score : 0.317
|
|
|