Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLSGINNFMNEVLFFKIFYVPFIILLVAFGYIFLTLRFKFLNIRMFKHAFTILCGKYDTDHHDGHITHFQAFVIALSSTVGLGTVAGVAIAVSMGGPGAIPWMMITGFFGMSAKFAEVTLAFRHRTEGQEQLFSGPFQYIRNGLEEFGFKKLGIILAAVYAVFFVLSGLGGSVAFQTNQMVSILSGYSNWVDSHPWFLSSIISALLALVIIGGIRRIARVSSALVPVMSLIYIFSCITIITFNIHNFSNVFKILFSNMIDFNAVGGGVVGAFVAGIQRAIFASEAGVGSASITHAVAKDEEPVRTGLVAMIEPCFDTMLICCLTGITIVITGAYQTGIGEGILVTQKAFETVSSWFPIFLIIAAPLFAFSSVISFVYCCEMGWLYLFGAKSIVIYRIAVVVVAFFSGLSKDIMAIANIGGTLFSCLALINMTALILFSSQINDEVQCYSKRLRNNKIN |
| 3S6P Chain:E ((1-33)) | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------FAAAVSAFAANMLSSVLKSEA---TSSIIKSVGETA-------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3S6P.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -158 for 126 contacts (-1.3/contact) +
2D Compatibility (PS) -3707 + (NN) -1191 + (LL) 35512
1D Compatibility (HY) -2000 + (ID) 500
Total energy: 27956.0 ( 221.87 by residue)
QMean score : -0.246
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