Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MPNIVTRFAPSPTGFLHIGGARTALFNWLYAKHHGGRFLLRIEDTDRKRSTQEAIDAIINGLKWLGVSYD-GEIV-------YQSKRIERHIEVANLLVEKGKAYCCCCPEDKVAEKKAKAREERKI---YKHKC---------TSVIPDAKPVVRFNVPDSQEIIVDDKIYGHIK-VNSDQLDDMVILRSDNTPTYIFAVVVDDHDAGITDIIRGSDHLTNTFKQVLIYQALDFDIPRFAHVPLIHGRDGNKLSKRHGATSVCDYEKMGILPKAMRNYLLRLGWSHGND-EIISNEQAVKWFNLESIGRSPARLNFKKLEHLNNHYINNMSNEDILTLML----------GESTLTNKKKNYLLQGLTELKKRANYLTELLDLAQFYIKD-PPFDLSE-EAEQVVKSNLDIIK-LLASFLSNIGDKNWNKGFLSSQVKEFSKLHSAKISDIYHSLRAPITGVMDAPGIIDIMIILGKDECIRRLQAV |
| 4GRI Chain:A ((24-502)) | --STRVRYAPSPTGLQHIGGIRTALFNYFFAKSCGGKFLLRIEDTDQSRYSPEAENDLYSSLKWLGISFDEGPVVGGDYAPYVQSQRSAIYKQYAKYLIESGHAYYCYCSPERL-ERIKKIQNINKMPPGYDRHCRNLSNEEVENALIKKIKPVVRFKIPLEGDTSFDDILLGRITWANKDISPDPVILKSDGLPTYHLANVVDDYLMKITHVLRAQEWVSSGPLHVLLYKAFKWKPPIYCHLPMVMGNDGQKLSKRHGSTALRQFIEDGYLPEAIINYVTLLGWSYDDKREFFSKNDLEQFFSIEKINKSPAIFDYHKLDFFNSYYIREKKDEDLFNLLLPFFQKKGYVSKPSTLEENQKLKLLIPL--IKSRIKKLSDALNMTKFFYEDIKSWNLDEF---KEVCSILELIKPILEGFEKRSSEEN-DKIFY-----DFAESN---LGEILLPIRIAALGSKVSPPLFDSLKLIGKSKVFERIKLA |
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General information:
TITO was launched using:
| RESULT:
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Template: 4GRI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -217895 for 3230 contacts (-67.5/contact) +
2D Compatibility (PS) -45889 + (NN) -16156 + (LL) 1376
1D Compatibility (HY) -38400 + (ID) 8400
Total energy: -325364.0 ( -100.73 by residue)
QMean score : 0.550
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