Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTINWQAKDPEGNSINCSMTVKVGSGGIQSATGGFGVSKFKSPLPEGKKSEILKLVEQNKEVFISGKTLYKAFTDVGQSVDD
1JJ2 Chain:G ((12-73))
-------------------------------------------IPEWKQEEVDAIVEMIES---RNTLLERALDD-------
General information:
TITO was launched using:
RESULT:
Template:
1JJ2.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 9400 for 141 contacts (66.7/contact) +
2D Compatibility (PS) -3112 + (NN) -2013 + (LL) 1836
1D Compatibility (HY) -1600 + (ID) 450
Total energy: 4061.0 ( 28.80 by residue)
QMean score : 0.392
(partial model without unconserved sides chains):
PDB file :
Tito_1JJ2.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1JJ2-query.scw
PDB file :
Tito_Scwrl_1JJ2.pdb
: