Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNKSFILSTGSYLPKKKLGNDEIALMVETSDEWIRQRTGITQRYIADEAELTSDLAVNSAKNAIEKAQISVDEIGLIIVATTTPDKTLPSCATIAQNKLKCKNAFSFDVQAACSGFIYAVTIADSLIKSNDRIKYALVIGAEIMSRIVDWKDRSTCVLFGDGAGAVIMKSTAHCNEMTENSTRGIISTNLYSDGNVDVLCTKGGISSTGD------SGKIYMNGREVFKHAVDKLTASIEETLRCNNLKITD--IDWLVPHQANIRIIEAVVKKLNFLMEKVINTVDQHANTSAASIPLALDYAIQKPKIKPGSLG--ILVAIGAGLTWGSVLLRY |
| 3IL4 Chain:A ((2-318)) | -NYARISCTSRYVPENCVTNHQLSEMMDTSDEWIHSRTGISERRIVTQ-ENTSDLCHQVAKQLLEKSGKQASEIDFILVATVTPDFNMPSVACQVQGAIGATEAFAFDISAACSGFVYALSMAEKLVLSG-RYQTGLVIGGETFSKMLDWTDRSTAVLFGDGAAGVLIEAA---------ETPHFLNEKLQADGQRWTALTSGYTINESPFYQGHKSKTLQMEGRSIFDFAIKDVSQNILSL-------VTDETVDYLLLHQASVRIIDKIARKTKISREKFLTNMDKYGNTSAASIPILLDEAVENGTLILGSQQRVVLTGFGGGLTWGSLLLTL |
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General information:
TITO was launched using:
| RESULT:
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Template: 3IL4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -237011 for 2862 contacts (-82.8/contact) +
2D Compatibility (PS) -32148 + (NN) -9362 + (LL) 1240
1D Compatibility (HY) -22800 + (ID) 6350
Total energy: -306431.0 ( -107.07 by residue)
QMean score : 0.408
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