Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSYIQILPETFSIISSLVLLLLGIVFNRRTINLLALGCTVITLIILILSAKDSGFFPFNSLLKLDLYIRSAQGLILIAGILVLLLLNLSKYDYEYEFSILI-LFTLFG---------MITLVSANNLISFYLSFELMSIPLYVLASFNKDSVYSCEAGVKYFTLSALSSCIMLYGMSLLYGYTGLVNFSELSSFLENHQMTYGIVFGLVLILIGLCFKLAIAPFHMWAPDVYQGAPTIVTAFFSTVPKAALVTFLIRFFMGEELVGVEKYFQP-VLLYISALSVLISAFGALRQRNLKRLLAYSSIGHIGFILASLSIFTRMGTDSSLIYLVIYIITNIGLFSYFIQIDDDDCSVANLSGIGKKRPVLAFHLSILLFSMAGIPPLAGFFAKLFIFKSLVNSGFIGMSLIFIVASVISCYYYLSIIKAMYFDKPSDSKVIYSKSLFIVTSVASLINIVLFMCV---EDLYSLIHLVTKSL |
| 4OC8 Chain:A ((2-388)) | ---TFFTGETLGQVD----LIVDAVYAGYKTER---GGMADPLVPLVGVSRQGGFRYRGTRER---------------PTLLVLTSNLAEPEWPDQLDETTGTFIYYGDNRHPGRLLHDTPRFGNQLLRQIFDWAHLGQRHLVPP-------------ILVFTTEATGRTFRFRGLAVP----GSPALAATEDLVALWKTTEGQRFQNYKAVFTI-LDEAVIP-RAWVHAVGRGET-------SGLAPVAWNAWLSAG-------GIRPLMAPRSLLVRSKAEQLPA--TPEDQALIEVIRQRYKENPFGFEACAGALTRLLLPDVARLDL-----------TRPWRDGGRD-------GIGRLRI--------------GQSPAAIEVDFALEAKCYGANNAVGVKEVSRLISRIKHREFGVLVTTSYVDRQAYQEVTDDGHPVILTTAQDIVGLLRSAGVRTPTQVDAWLDGITASV |
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General information:
TITO was launched using:
| RESULT:
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Template: 4OC8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -382974 for 2856 contacts (-134.1/contact) +
2D Compatibility (PS) -39063 + (NN) 4345 + (LL) 8964
1D Compatibility (HY) 800 + (ID) 3300
Total energy: -411228.0 ( -143.99 by residue)
QMean score : 0.188
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