Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNIHSDSPRQCLEEIIKSASAKFNESIDIAVNL-GIDSRKSEEQVRGTVVLPKGIGKDIKVAVFTQGKHLLEAEKAGANIVGGEDLVQEIKKGKKL------DVDWCITTPDFIAKI-TPIAKILGAKGLMPNPKFGTMTSNVAEAIKTIKSGQIKFRTDKNGIIHGKLGNIKFSVDDLLKNLKAFLKVIKSNKPISVKGVYF-KSVFLNSTMGKAYKMSKVEDII
1DWU Chain:A ((22-213))
----------------------FTQSLDLIINLKELDLSRPENRLKEQVVLPNGRGKEPKIAVIAKGDLAAQAEEMGLTVI-RQDELEELGKNKKMAKKIANEHDFFIAQADMMPLVGKTLGPVLGPRGKMPQP--VPANANLTPLVERLKK-TVLINTRDKPLFHVLVGNEKMSDEELAENIEAILNTVSRK---YEKGLYHVKSAYTKLTMGPPAQIEK-----
General information:
TITO was launched using:
RESULT:
Template:
1DWU.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -82332 for 1313 contacts (-62.7/contact) +
2D Compatibility (PS) -19885 + (NN) -8451 + (LL) 2140
1D Compatibility (HY) -12000 + (ID) 2800
Total energy: -123328.0 ( -93.93 by residue)
QMean score : 0.542
(partial model without unconserved sides chains):
PDB file :
Tito_1DWU.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1DWU-query.scw
PDB file :
Tito_Scwrl_1DWU.pdb
: