Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MFVNGGQLKKINQKWLIIGTGLLLFMMMLPS--IILLAKMTIGLVMVLVVAIAIKIASKTISNVLEDKQADPNQLTSQTTQSRIINLAVGLVSIFTGGLSLLIIAKTGIAVICAAVVTLAIYEYAKDYKYAEDKEIGKSINDKLDEIAKNTTNFIVSGIEKLVSPQEQQV------------------------------------------------------------------------------------------------------------------------------- |
5DA0 Chain:A ((14-484)) | QREWFANPRKDVLAGIVVALALIPEAIAFSIIAGVDPQVGLYASFIIALITAFLGGRPGMISAATGAMALLMTGLVKDHGIQYLFAATVLTGVLQVVFGWAKLARYLKFVPRSVMVGFVNALAILIFMAQLPQFVGANWQMYAMVAAGLAIIYLLPLVFKAMPSALVAIVVLTVVAVVTGADVKTVGDMGTLPTALPHFQFPQVPLTFETLAIIFPVALTLSLVGLLESLLTAQLIDERTDTTSDKNVESRGQGVANIVTGFFGGMAGCAMIGQSMINVTSGGRGRLSTFVAGAFLMVLILALQPLLVQIPMAALVAVMMVVAISTFDW-----GSLRFPKGETVVMLATVAVTVFTHDLSLGVLIGVVLSALFFARKVSQLSQVTPVDEVDGTRTYRVRGQLFFVSTHDFLHQFDFTHPARRVVIDLSDAHFWDGSAVGALDKVMLKFMRQGTSVELRGLNAASATLVERL |
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General information:
TITO was launched using:
| RESULT:
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Template: 5DA0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -32944 for 842 contacts (-39.1/contact) +
2D Compatibility (PS) -16782 + (NN) -2756 + (LL) 400
1D Compatibility (HY) -1600 + (ID) 1000
Total energy: -54682.0 ( -64.94 by residue)
QMean score : 0.153
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