Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKWLDIENIAEALEEKFPGEDIVNIRFTKLKEKVLNLEGFS-DDEKRCNEKILEAIQAAWIEERS
3Q5W Chain:A ((143-175))
-----------------------------ATNVVHELPEFHNPNHNVYKSQAYYELTGAWLVVLR
General information:
TITO was launched using:
RESULT:
Template:
3Q5W.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -3189 for 144 contacts (-22.1/contact) +
2D Compatibility (PS) -3560 + (NN) -2231 + (LL) 2516
1D Compatibility (HY) -2000 + (ID) 250
Total energy: -8714.0 ( -60.51 by residue)
QMean score : 0.725
(partial model without unconserved sides chains):
PDB file :
Tito_3Q5W.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3Q5W-query.scw
PDB file :
Tito_Scwrl_3Q5W.pdb
: