Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | METDIVVIGAGPVGIFTAFQAGMLDMRCHIIDVLDQAGGQCTALYPEKPIYDIPGYPVITAQKLIEQLMEQASPFE-PVYHLSQRVEEIANNDSQSFIVVTSAGTKVKCKAIIIAAGNGIFEPNRPPLSGILEYENKSVFY-NVNKISDFQDKIIVIAGGGDSAADWTVELSKVAKKIYVIHRRKEFRCVSETRNKLKLLESSGRIELVVPYQLHKLTGNDGQLSAVIIKNITSKEEKKISADFLLPFFGLSMDLGPIGSWDIQLERSRVVVDQATLRTSRDRIYAIGD-VAAYLGKLKLILNGFAESTMACYDIYKVIHNSPVNFQYSTSKVVRGKKSDLL |
| 3F8D Chain:A ((17-316)) | ---DVIIVGLGPAAYGAALYSARYMLKTLVIG--ETPGGQLTE---AGIVDDYLGLIEIQASDMIKVFNKHIEKYEVPV--LLDIVEKIENR--E-FVVKTKRKGEFKADSVILGIG---VKRRKLGVPGEQEFAGRGISYCSVADAPLFKNRVVAVIGGGDSALEGAEILSSYSTKVYLIHRRDTFKA---QPIYVETVKKKPNVEFVLNSVVKEIKG-DKVVKQVVVENLKTGEIKELNVNGVFIEIGFDPPTDFAKSNGIETDTNGYIKVDEWMRTSVPGVFAAGDCTSAWLG-FRQVITAVAQGAVAATSAYRYVTEK-------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3F8D.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -261731 for 2569 contacts (-101.9/contact) +
2D Compatibility (PS) -31147 + (NN) -5861 + (LL) 1792
1D Compatibility (HY) -19200 + (ID) 3600
Total energy: -319747.0 ( -124.46 by residue)
QMean score : 0.487
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