Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMFSNLYRGLLKTSSRFSDGVKSIFSAKKKLDQSLLDELEELLISMDIGHKTSKLIIDRLASIKFDKEVEHNIITQQLMSEIEAILNPVVQPLILDKNPHIIMVCGVNGNGKTTTIGKLAYKYKNMGKSVMLVACDTFRAAASEQLNIWAERSDCFIVTGEYGNDSASVAYRAVSQAIKG-SVDVVLIDTAGRLQNNVNLMEELSKIYRTIKKLDGTAPHDVILVLDATTGQNAYSQLEAFSKMVSVTGLIITKLDGTAKGGVVIGLAETYRVKLHAIGIGESIEDLREFTSKEFAKALFGCD
1OKK Chain:D ((114-301))--------------------------------------------------------------------------------------------------------------KTTTIAKLGRYYQNLGKKVMFCAGDTFRAAGGTQLSEWGKRLSIPVIQGPEGTDPAALAYDAV-QAMKARGYDLLFVDTAGRLHTKHNLMEELKKVKRAIAKADPEEPKEVWLVLDAVTGQNGLEQAKKFHEAVGLTGVIVTKLDGTAKGGVLIPIVRTLKVPIKFVGVGEGPDDLQPFDPEAFVEALLE--


General information:
TITO was launched using:
RESULT:

Template: 1OKK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -139438 for 1458 contacts (-95.6/contact) +
2D Compatibility (PS) -20252 + (NN) -7710 + (LL) 7904
1D Compatibility (HY) -18000 + (ID) 4650
Total energy: -182146.0 ( -124.93 by residue)
QMean score : 0.659

(partial model without unconserved sides chains):
PDB file : Tito_1OKK.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1OKK-query.scw
PDB file : Tito_Scwrl_1OKK.pdb: