Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
---------MITLDGRLVAHKHINVNKGELAHRHSTLAGGKPVLCPVLKVEKGKITYIGNNSEHYKPALANLYNAVKN
2JEE Chain:A ((3-80))
MSLEVFEKLEAKVQQAIDTITLLQMEIEELKEKNNSLSQEVQNAQHQREELERENNHLKEQQNGWQERLQALLGRMEE
General information:
TITO was launched using:
RESULT:
Template:
2JEE.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 3773 for 275 contacts (13.7/contact) +
2D Compatibility (PS) -6843 + (NN) 419 + (LL) 0
1D Compatibility (HY) -400 + (ID) 250
Total energy: -3301.0 ( -12.00 by residue)
QMean score : -0.011
(partial model without unconserved sides chains):
PDB file :
Tito_2JEE.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2JEE-query.scw
PDB file :
Tito_Scwrl_2JEE.pdb
: