Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MATHLSFRQGVQECIPTLLGYAGVGISFGIVASSQNFSILEIILLCLVIYAGAAQFIMCALFIAGTPISAIVLTVFIVNSRMFLLSMSLAPNFKTYGFWNRVGLGSLVTDETFGVAITPYLKGEAINDRWMHGLNITAYLFWAISCVAGALFGEYISNPQTLGLDFAITAMFIFLAIAQFESITKSRLRIYIVLIIAVIVMMLSLSMFMPSYLAILIAATISAALGVMMER |
| 1IIJ Chain:A ((1-35)) | ----------------------------------------------------------------------------------------------------------------------------------------------------------EQRASPVTFIIATVVGVLLFLILVVVVGILIKRRR------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1IIJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -7531 for 140 contacts (-53.8/contact) +
2D Compatibility (PS) -3419 + (NN) 1564 + (LL) 18344
1D Compatibility (HY) -2000 + (ID) 250
Total energy: 6708.0 ( 47.91 by residue)
QMean score : -0.160
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