Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNWKLTKTLFIFVFILVNIVLVSIYVNKVNRSHINEVESNNEVNFQQEEIKVPASILNKSVKGIKLEQITGRSKDFSSKAKGDSDLTTSDGGKLLNANISQSVKVSDNNLKDLKDYVNKRVFKGSEYQLSEINSGSVKYEQTYDNFPILNNSKAMLNFNIEDNKAASYKQSMMDDIKPTDGADKKHQVIGVRKAIEALYYNRYLKKGDEVINARLGYYSVVNETNVQLLQPNWEIKVKHDGKDKTNTYYVEATNNNPKIINH |
| 2GU3 Chain:A ((70-132)) | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------EAKEGISEDKAAKIIKDEG---LVSKQKEVHLAREGN---------VLLWEVTYLDKE-GQYSLSYVDFTTGKILK--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2GU3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -3125 for 414 contacts (-7.5/contact) +
2D Compatibility (PS) -6937 + (NN) -2875 + (LL) 12128
1D Compatibility (HY) 1600 + (ID) 450
Total energy: 341.0 ( 0.82 by residue)
QMean score : 0.282
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