Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKALLLKTSVWLVLLFSVMGLWQVSNAAEQYTPIKAHVVTTIDKATTDKQQVTPTKEAAHQFGEEAATNVSASAQGTADEINNKVTSNAFSNKPSTAVSTKVNETHDVDTQQASTQKPTQSATFTLSNAKTASLSPRMFAANVPQTTTHKILHTNDIHGR--------LAEEKGRVIGMAKLKTIKEQEKPD----LMLDAGDAFQGLPLSNQSKGEEMAKAMNAVGYDAMAVGNHEFDFGYDQLKKLEGMLDFPMLSTNV-YKDGKRAF--KPSTIVTKNGIRYGIIGVTTPETKTKTRPEGIK-GVEFRDPLQSVTAEMMRIYKDVDTFVVISHLGIDPSTQETWRGDYLVKQLSQNPQLKKRI----TVIDGHSHTVLQNGQIYNNDALAQTGTALANIGKVTFNYRNGEVSNIKPSLINVKDVENVT-------PNKALAEQINQADQTFRAQTAEVI---IPNNTIDFKGERDDVRTRETNLGNAIADAMEAYGVKNFSKKTDFAVTNGGGIRASIAKGKVTRYDLISVLPFGNTIAQIDVKGSDVWTAFEHSLGAPTTQKDGKTVLTANGGLLHISDSIRVYYDMNKPSGKRINAIQILNKETGKFENIDLKRVYHVTMNDFTASGGDGYSMF--GGPRE--EGISLDQVLASYLKTANIAKYDTTEPQRMLLGKPAVSEQPAKGQQGSKGSESGKDVQPIGDDKAMNPAKQPATGKVVLLPTHRGTVSSGTEGSGRTLEGATVSSKSGNQLVRMSVPKGSAHEKQLPKTGTNQSSSPAAMFVLVAGIGLIATVRRRKAS |
| 3IVD Chain:A ((9-485)) | ------------------------------------------------------------------------------------------------------------------------------------------------------IIYTNDLHAHVEPYKVPWIADGKRDIGGWANITTLVKQEKAKNKATWFFDAGDYFTGPYISSLTKGKAIIDIMNTMPFDAVTIGNHEFDHGWDNTLLQLSQAKFPIVQGNIFYQNSSKSFWDKPYTIIEKDGVKIGVIGLHGVFAFNDTVSAATRVGIEARDEIKWLQRYIDELKGKVDLTVALIHEGV-PARQSSMGGTDVRRALDKDIQTASQVKGLDILITGHAHVGTPEPIKVGNTLILSTDSGGIDVGKLVLDYKE------KPHNFTVKNFELKTIYADEWKPD----QQTKQVIDGWNKKLDEVVQQTVAQSPVELK----RAYGESASLGNLAADALLAAAGKN----TQLALTNSGGIRNEIPAGAITMGGVISTFPFPNELVTMELTGKQLRSLMEH--GA-----------SLSNGVLQVSKGLEMKYDSSKPVGQRVITLTLNGKP------IEDATVYHIATQSFLADGGDGFTAFTEGKARNITGGYYVYHAVVDYFKAGN--------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3IVD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -120930 for 3899 contacts (-31.0/contact) +
2D Compatibility (PS) -48442 + (NN) -21644 + (LL) 18108
1D Compatibility (HY) -25200 + (ID) 7050
Total energy: -205158.0 ( -52.62 by residue)
QMean score : 0.480
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