Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTYDKKMINRINRIQGQLNGVVKMMEEEKDCKDIITQLSASKGSIQRLMGIIISENLIECVKTAEENNESSQELINEAVNLLVKSK
4CDK Chain:A ((69-127))
-------------------GVVKLEQPELDPKPCLTVLGKAKRAVQRGATAVIF-DVSENPEAIDQLNQGSEDPLKRPV-------
General information:
TITO was launched using:
RESULT:
Template:
4CDK.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 1369 for 361 contacts (3.8/contact) +
2D Compatibility (PS) -6150 + (NN) 404 + (LL) 2096
1D Compatibility (HY) -1200 + (ID) 850
Total energy: -4331.0 ( -12.00 by residue)
QMean score : 0.041
(partial model without unconserved sides chains):
PDB file :
Tito_4CDK.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4CDK-query.scw
PDB file :
Tito_Scwrl_4CDK.pdb
: