Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIMFVLCGFIFPLTVTALGQVLFPEQANGSLVKQDGKVIGSKLIGQQWTEPKYFHGRISAVNYNMNANEVKESGGPASGGSNYGNSNPELKKRVQETIKQEGKKISSDAVTASGSGLDPDITV
3QE7 Chain:A ((99-138))
-VLFCLVSFIVKKAGTGWLDVLFPPAAMGAIV----AVIGLELAG------------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3QE7.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -10897 for 161 contacts (-67.7/contact) +
2D Compatibility (PS) -3973 + (NN) 276 + (LL) 2620
1D Compatibility (HY) -6000 + (ID) 850
Total energy: -18824.0 ( -116.92 by residue)
QMean score : -0.251
(partial model without unconserved sides chains):
PDB file :
Tito_3QE7.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3QE7-query.scw
PDB file :
Tito_Scwrl_3QE7.pdb
: