Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MQLQTMSNSIFIKNLIFAINESLEYSETNSVMEVTFQKAIGFTQYNFEGEKLKLKDDLKELISLVGREEAVLIFVNRLNEGLYCILNQLIEWDNLNYQFAMYKEAMHNYLFNTIEKLNDDTLFLLHQDGLITLPEHKYKTVAVKSTFGSRDFTFRFKFPEESDTVNTHQMLNKAISITGSLANTHLEQPQKYKAHFKKIPIETKNLTS |
| 1SEB Chain:D ((75-151)) | ----------------------------------------------------------------------------------------------------------------------------------------KYKDKYV-DVFGA-NYYYQCYFSKK------------KTCMYGGVTEH-----DKYRSITVRVFEDGKNLLS |
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General information:
TITO was launched using:
| RESULT:
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Template: 1SEB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -2702 for 182 contacts (-14.8/contact) +
2D Compatibility (PS) -5234 + (NN) 643 + (LL) 12564
1D Compatibility (HY) -3200 + (ID) 700
Total energy: 1371.0 ( 7.53 by residue)
QMean score : 0.284
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