Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MATKKDVHDLFLNHVNS--NAVKTRKMMGEYIIYYDSVVIGGLY--DNRLLVKATKSVRHQLQDNTLVSPYPGAKEMILIPD--ITEAINLTNLFELIKNDLKN
2KL4 Chain:A ((20-116))
----RDRTEEILSWVAATFPNLEPQMKWNTPMFSNQGTFIIGFSTSKHHLSVSPEEIGISQFADAIAQAGYSATKGLFRIPWNDPVHYELLKQMIEFNIQD---
General information:
TITO was launched using:
RESULT:
Template:
2KL4.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -46529 for 590 contacts (-78.9/contact) +
2D Compatibility (PS) -9623 + (NN) -2458 + (LL) 628
1D Compatibility (HY) -2000 + (ID) 800
Total energy: -60782.0 ( -103.02 by residue)
QMean score : 0.280
(partial model without unconserved sides chains):
PDB file :
Tito_2KL4.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2KL4-query.scw
PDB file :
Tito_Scwrl_2KL4.pdb
: