Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MYYSYGNYEAFARPKKPENVENKSAYLIGSGLASLAAACFLIRDGQMEGSKIHILEELPKAGGSLDGENMPLKGYVVRGGREMEN-HF--ECLWDLFRSIPSLEIDNASVLD-EFYWLNKEDPNYSRCRVIEKQG-QRLVTDGDFTLTKTAIKEILDLCL-TNEEDLDDVKITDVFSDDFFNSNFWIYWKT----MFAFEP-WHSAMEMRRYLMRFVHHIGGLADFSALKFTKYNQYESLVLPMVEYLKSHGVQFEYDVKVEDIKVDVTTSQKIAREILIHRHGKAESIKLTVDDLVFVTNGSITESSTYGDNDTPAPPTDELGGSWTLWKNLARQSPEFGNPDKFCQNIPKKSWFVSATSTTNNKEIIDTIESICKRDPLAGKTVTGGIITINDSAWQMSFTINRQQQFKDQPENEISTWIYALYSDVNGDYIKKPITECSGNEICQEWLYHLGVSTDKIEDLAKHVSNTIPVYMPYITSYFMTRAIGDRPLVVPHQSQNLSFIGNFAETERDTVFTTEYSVRTAMEAVYQLLNIDRGIPEVINSTFDLRVLMDAVYELNDHQDLREITKDSKMQKLALAGFLKKIKGTYIETLLKEHKLL |
| 3KA7 Chain:A ((1-258)) | ----------------------MKTVVIGAGLGGLLSAARL----SKAGHEVEVFERLPITGGRFTNLS--YKGFQLSSGAFHMLPNGPGGPLACFLKEVEASV----NIVRSEMTTV-RVPLKKGNPDYVKGFKDISFNDFP-SLLSYKDRMKIALLIVSTRKNRPSGSSLQAWIKSQVSDEWLIKFADSFCGWALSLKSDEVPVEEVFEIIENMY-------RFGGTGIPE-GGCKGIIDALETVISANGGKIHTGQEVSKILIENG----KAAGIIA--DDRIH-----DADLVISNLGHAATAVLCS--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3KA7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -85028 for 1806 contacts (-47.1/contact) +
2D Compatibility (PS) -26225 + (NN) -3288 + (LL) 20680
1D Compatibility (HY) -9600 + (ID) 1650
Total energy: -105111.0 ( -58.20 by residue)
QMean score : 0.311
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