Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MINQSIWRSNFRILWLSQFIAIAGLTVLVPLLPIYMASL-QNLSVVEIQLWSGIAIAAPAVTTMIASPIWGKLGDKISRKWMVLRA---LLGLAVCLFLMALCTT-PLQFVLVRLLQGLF----G-GVVDASSAFASAEAPAEDRGKVLGRLQSSVSAGSLVGPLIGGVTASILGFSALLMSIAVITFIVCIFGALKLIETTHMPKSQ-TPNI-NKG---IRRSFQCLLCTQQTCRFIIVGVLANFAMYGMLTALSPLASSVN---HTAIDDRSVIGFLQSAFWTASILSAPLWGRFNDKSYVKSVYIFATIACGCSAILQGLATNIEFLMAARILQGLTYSALIQSVMFVVVNACHQQLKGTFVGTT-NSMLVVGQIIGSLSGAAITSYTTPATTFIVMGVVFAVSSLFLICSTITNQINDHTLMKLWELKQKSAK |
| 2CFQ Chain:A ((6-396)) | -------NTNFWMFGLFFFFYFFIMGAYFPFFPIWLHDINHISK-----SDTGIIFAAISLFSLLFQPLFGLLSDKLGLRKYLLWIITGMLVMFAPFFIFIFGPLLQYNILVGSIVGGIYLGFCFNAGAPAVEAFIEKVSR--RSNFEFGRARMFGCVGWALGASIVGIMFT-INNQFVFWLGSGCALILAVL-LFF-AKTDAPSSATVANAVGANHSAFSLKLALELFRQPKLWFLSLYVIGVSCTYDVFDQQFANFFTSFFATGEQ---GTRVFGYVTTMGELLNASIMFFAPLIINRIGGKNALLLAGTIMSVRIIGSSFATSALEVVILKTLHMFEVPFLLVGCFKYITSQFEVRFSATIYLVCFCFFKQLAMIFMSVLAGNMYESIGFQGAYLVLGLVALGFTLIS-------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2CFQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -296876 for 3085 contacts (-96.2/contact) +
2D Compatibility (PS) -36905 + (NN) 6693 + (LL) 4536
1D Compatibility (HY) -25600 + (ID) 2450
Total energy: -350602.0 ( -113.65 by residue)
QMean score : 0.265
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