Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ---------------------------------------MNGKKANTINRYKYFHHVNHQKIQQSSKKTLWASLIITLLFTVIEFVGGLVSNSL-----ALLSDSFHMLSDVLALGLSMLAIYFA---------SKKPTARYTFGYLRFEILVAFLNGLALIVI--------SIWILYEAIVRIIYPQPIESGIMFMIASIGLLVNIIL----------TIILVRSL-----KQEDNINIQSA--------LWHFMGDLLNSIGVIVAVVLIYFTGWRIIDPIISIVISLIILRGGYKITRNAWL--ILMESVPQHLDTDQIMADIKNIDGILDVHEFHLWSITTEHYSLSAHVVLDKKYEGDDYQAIDQVSSLLKEKYGIAHSTLQIENLQLNPLDEPYFDKLT |
| 2IYF Chain:A ((8-400)) | AHIAMFSIAAHGHVNPSLEVIRELVARGHRVTYAIPPVFADKVAATGPRPVLYHSTLPGPDADPEAWGSTLLDNVEPFLNDAIQALPQLADAYADDIPDLVLHDITSYPARVLARRWGVPAVSLSPNLVAWKGYEEEVAEPMWREPRQTERGRAYYARFEAWLKENGITEHPDTFASHPPRSLVLIPKALQPHADRVDEDVYTFVGACQEGGWQRPAGAEKVVLVSLGSAFTQPAFYRECVRAFGNLPGWHLVLQIGTPAELGELPDNVEVH---DWVPQLAILR-QADLFVTHAGAGGSQEGLATATPMIAVPQAVDQFGNADMLQG-LGVARKLATE--EATADLLRETALALVD---DPEVARRLRRIQAEMAQEGGTRRAADLIEAELPA----------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2IYF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -212181 for 2130 contacts (-99.6/contact) +
2D Compatibility (PS) -30480 + (NN) 3276 + (LL) 1600
1D Compatibility (HY) 3600 + (ID) 1850
Total energy: -236035.0 ( -110.81 by residue)
QMean score : 0.205
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