Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKIISIAIIVLALVLSGCGVPTKSEVAQKSSKVEVKGERPTIHFLGQASYENDMNIVKDQLENAGFNVKMNIQPDYGSYRTQRQAGNYDIQIDDWMTVFGDPNYAMTALFSSTGSNSLLKDKHVDQLLNKASTQNEADVKQTYKQIEDEVVFDKGYMAPLYGSKKNLVYDNKVLDKNSVGLPNSRALIWQQFDYNNSRERDTRPLVMTQQDGEIPTLDPIRSIAPSVYSINMNMYTRLLLLDENDHLTTKGSLSRDYAVNKDNKAFYFLLRDDDYFAKVVNGQARNTGERVSAEDVKFSLDRARDKKSVPNNNTYNMHKHINDIKILKDEDIDQLRKEKDKDDKSIYDKLIKAYNVKSLTTDGQKVNNKDGIYQIVKITTDQSMPREVNYLTHSSAGILSKKFVNQVNQEYPKGYGDSSTIPANSDGKNALYASGAYIMTQKN-AYQATFQRNPGFNETEKGSYGSPKIKNITLKFNGDPNNALSELRNHSIDMLADVNQKHFDLIKSDKNLSIIRKNGRKSVFLMLNIKKGIFKTHPNLRQAVVNAIDQDQFIK-FYRGDKFKIASPITPLVDTGN------EQRQDLEKVEKAINQ |
| 1XOC Chain:A ((19-341)) | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------QQGGDLVVGS-IGEPTLFNSLYSTDDASTDIENMLYSFLTKTDEKLNVK--LSLAESIKELDGGLAYDVKIKKGVKFH---------DGKELTADDVVFTYSVPLSKDYKGER--GSTYEMLKSVEKKG-------------------------------------------DY-EVLFKLKYKDGNFYNNALD-STAILPKHILGNVPIAD---L------EENEFNRKKPIGSGPFKFKEWKQGQYIKLEANDDYFE------GRPYLDTVTYKVIPDANAAEAQLQAGDINFFN-VPATDYKTAEKFNNLKIVTDLALSYVYIGWNEKN-ELFKDKKVRQALTTALDRESIVSQVLDGDGEVAYIPESPLSWNYPKDIDVPKFEYNEKKAKQMLAE |
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General information:
TITO was launched using:
| RESULT:
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Template: 1XOC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -41187 for 2286 contacts (-18.0/contact) +
2D Compatibility (PS) -33229 + (NN) -14206 + (LL) 14200
1D Compatibility (HY) -10000 + (ID) 3000
Total energy: -87422.0 ( -38.24 by residue)
QMean score : 0.376
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