Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTTQMKIKTYLVAGIKAALLDTTGIKLASKSETTSHTYQHQALVDQLHELIANTDLNKLSYLNLDAFQKRDILAAHYIAKSAIRTKNLDQMTKAKQRLESIYNSISNPLHSQNN
2WIN Chain:M ((10-92))
------------------------------SLPTSNEYQNEKLANELKSLLDELNVNELATGSLNTYYKRTIKISGQKAMYALKSKDFKKMSEAKYQLQKIYNEIDEALKSKY-
General information:
TITO was launched using:
RESULT:
Template:
2WIN.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -4356 for 527 contacts (-8.3/contact) +
2D Compatibility (PS) -9213 + (NN) -4697 + (LL) 2764
1D Compatibility (HY) -4800 + (ID) 1350
Total energy: -21652.0 ( -41.09 by residue)
QMean score : 0.596
(partial model without unconserved sides chains):
PDB file :
Tito_2WIN.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2WIN-query.scw
PDB file :
Tito_Scwrl_2WIN.pdb
: