Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MYRYKPLLQSIHLPNGIKISNRFVLSPMTVNASTKEGYITKADLAYAARRSNSAGMQVTGAAYIEPYGKLFEYGFNIDHDACIPGLTNMASTMKQHGSLAIIQLAHAGRFSNQAIL-NFGKVYGPSPMTLHSPIEHVVI---------------AMSHEKINSIIQQYRDATLRAIKAGFDGVEISIAQRLLIQTFFSTFSNRRTDHYGADSLKNRARLCLEVMRAVQEVIDKEAPDNFILGFRATPEETRGSDLGYTIDEFNQLIDWVMDVSNIQYLAIASWGRHIYQNTSRTPGD--HFGRPVN----QIVYEHLAGRIPLIASGGINSPESALDALQHA--DMVGMSSPFVTEPDFVHKLAEQRPHDINLEFSMADLEDLAIPHAAFKDIVKMMDYGEGLKKHTRDALRQLEQNYHDSSS |
| 4JIP Chain:A ((13-346)) | ----------------IALANRIVMAPLTRNRSP--GAIPNNLNATYYEQRATAGLIVTEGTPISQQGQGYADVPGLYKREAIEGWKKITDGVHSAGGKIVAQIWHVGRISHTSLQPHGGQPVAPSAITAKS--KTYIINDDGTGAFAETSEPRALTIDDIGLILEDYRSGARAALEAGFDGVEIHAANGYLIEQFLKSSTNQRTDDYGG-SIENRARFLLEVVDAVAEEIGAGR-----TGIRLSP-VTPANDI-FEADP-QPLYNYVVEQLGKRNLAFI----HVVEGATGGPRDFKQGDKPFDYASFKAAYRNAGGKGLWIANNGYDR-QSAIEAVESGKVDAVAFGKAFIANPDLVRRLKNDAP------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4JIP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -189067 for 2733 contacts (-69.2/contact) +
2D Compatibility (PS) -33483 + (NN) -14857 + (LL) 4772
1D Compatibility (HY) -17200 + (ID) 4850
Total energy: -254685.0 ( -93.19 by residue)
QMean score : 0.399
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