Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTNDIYFMTLAIEEAKKAAQLGEV----PIGAIITKDDEVIARAHNLRETLQQPTAHAEHIAIERAAKVLGSWRLEGCTLYVTLEPC------VMCAGTIVMSRIPRVVYGADDPKGGCSGSLMNLLQQSNFNHRAIVDKGVLKEACSTLLTTFFKNLRANKKSTN
2HXV Chain:A ((17-151))
------FMKRAIELAKKG--LGRVNPNPPVGAVVVKDGRIIAEG--FHPYFGGP--HAERMAIESARK--KGEDLRGATLIVTLEPCDHHGKTPPCTDLIIESGIKTVVIGTRDPN-PVSGNGVEKFR----NHGIEVIEGVLEEEVKKLCEFF------------
General information:
TITO was launched using:
RESULT:
Template:
2HXV.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -104211 for 1041 contacts (-100.1/contact) +
2D Compatibility (PS) -13824 + (NN) -7595 + (LL) 1692
1D Compatibility (HY) -11200 + (ID) 2850
Total energy: -137988.0 ( -132.55 by residue)
QMean score : 0.584
(partial model without unconserved sides chains):
PDB file :
Tito_2HXV.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2HXV-query.scw
PDB file :
Tito_Scwrl_2HXV.pdb
: