Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKVAVIMGSSSDWKIMQESCNMLDYFEIPYEKQVVSAHRTPKMMVQFASEARERGINIIIAGAGGAAHLPGMVASLTTLPVIGVPIETKSLKGIDSLLSIVQMPGGIPVATTAIGAAGAKNAGILAARMLSIQNPSLVEKLNQYESSLIQKVEDMQNELQ
3OOW Chain:A ((6-151))
VQVGVIMGSKSDWSTMKECCDILDNLGIGYECEVVSAHRTPDKMFDYAETAKERGLKVIIAGAGGAAHLPGMVAAKTTLPVLGVPVKSSTLNGQDSLLSIVQMPAGIPVATFAIGMAGAKNAALFAASILQHTDINIAKALAEFRA--------------
General information:
TITO was launched using:
RESULT:
Template:
3OOW.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -122222 for 1251 contacts (-97.7/contact) +
2D Compatibility (PS) -15794 + (NN) -5335 + (LL) 1404
1D Compatibility (HY) -15600 + (ID) 4300
Total energy: -161847.0 ( -129.37 by residue)
QMean score : 0.622
(partial model without unconserved sides chains):
PDB file :
Tito_3OOW.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3OOW-query.scw
PDB file :
Tito_Scwrl_3OOW.pdb
: