Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEHTIAVIPGSFDPITYGHLDIIERSTDRFDEIHVCVLKNSKKEGTFSLEERMDLIEQSVKHLPNVKVHQFSGLLVDYCEQVGAKTIIRGLRAVSDFEYELRLTSMNKKLNNEIETLYMMSSTNYSFISSSIVKEVAAYRADISEFVPPYVEKALKKKFK
3LCJ Chain:A ((2-157))
---TGAVCPGSFDPVTLGHVDIFERAAAQFDEVVVAILVNPAKTGMFDLDERIAMVKESTTHLPNLRVQVGHGLVVDFVRSCGMTAIVKGLRTGTDFEYELQMAQMNKHIAG-VDTFFVATAPRYSFVSSSLAKEVAMLGGDVSELLPEPVNRRLRDRLN
General information:
TITO was launched using:
RESULT:
Template:
3LCJ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -108031 for 1221 contacts (-88.5/contact) +
2D Compatibility (PS) -17154 + (NN) -8380 + (LL) 460
1D Compatibility (HY) -17600 + (ID) 3450
Total energy: -154155.0 ( -126.25 by residue)
QMean score : 0.588
(partial model without unconserved sides chains):
PDB file :
Tito_3LCJ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3LCJ-query.scw
PDB file :
Tito_Scwrl_3LCJ.pdb
: