Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDNEKGLLIVLSGPSGVGKGTVRKRIFEDPSTSYKYSISMTTRQMREGEVDGVDYFFKTRDAFEALIKDDQFIEYAEYVGNYY--GTPVQYVKDTMDEGHDVFLEIEVEGAKQVRKKFPDALFIFLAPPSLDHLRERLVGRGTESNEKIQSRINEARKEVEMMNLYDYVVVNDEVELAKNRIQCIVEAEHLKRERVEAKYRKMILEAKK
1ZNX Chain:A ((20-191))
-----GRVVVLSGPSAVGKSTV-VRCLRERIPNLHFSVSATTRAPRPGEVDGVDYHFIDPTRFQQLIDQGELLEWAEIHGGLHRSGTLAQPVRAAAATGVPVLIEVDLAGARAIKKTMPEAVTVFLAPPSWQDLQARLIGRGTETADVIQRRLDTARIELAAQGDFDKVVVNRRLESA-------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1ZNX.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -69376 for 1157 contacts (-60.0/contact) +
2D Compatibility (PS) -18413 + (NN) -6032 + (LL) 3844
1D Compatibility (HY) -12800 + (ID) 3700
Total energy: -106477.0 ( -92.03 by residue)
QMean score : 0.605
(partial model without unconserved sides chains):
PDB file :
Tito_1ZNX.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1ZNX-query.scw
PDB file :
Tito_Scwrl_1ZNX.pdb
: