Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MGQNDLVKTLRMNYLFDFYQSLLTNKQRNYLELFYLEDYSLSEIADTFNVSRQAVYDNIRRTGDLVEDYEKKLELYQKFEQRREIYDEMKQHLSNPEQIQRYIQQLEDLE
1XSV Chain:A ((5-110))
----DLVKTLRMNYLFDFYQSLLTNKQRNYLELFYLEDYSLSEIADTFNVSRQAVYDNIRRTGDLVEDYEKKLELYQKFEQRREIYDEMKQHLSNPEQIQRYIQQLEDLE
General information:
TITO was launched using:
RESULT:
Template:
1XSV.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 16319 for 637 contacts (25.6/contact) +
2D Compatibility (PS) -10669 + (NN) 4001 + (LL) 76
1D Compatibility (HY) 4000 + (ID) 600
Total energy: 13127.0 ( 20.61 by residue)
QMean score : 0.168
(partial model without unconserved sides chains):
PDB file :
Tito_1XSV.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1XSV-query.scw
PDB file :
Tito_Scwrl_1XSV.pdb
: