Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSQWKRISLLIVFALVFGIIAFFHESRLGKWIDNEVYEFIYSSESFITTSIMLGATKVGEVWAMLCISLLLVAYLMLKRHKIEALFFALTMALSGILNPALKNIFDRERPTLLRLIDITGFSFPSGHAMGSTAYFGSGIYLLNRLNQGNSKGILIGLCAAMILLISISRVYLGVHYPTDIIAGIIGGVFCIILSTLLLRNKLIN |
3A0B Chain:T ((1-30)) | --------------------------------------------------------------------METITYVFIFACIIALFFFAIFFREPPRIT---------------------------------------------------------------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3A0B.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -4599 for 106 contacts (-43.4/contact) +
2D Compatibility (PS) -3381 + (NN) -3829 + (LL) 13776
1D Compatibility (HY) -3600 + (ID) 250
Total energy: -1883.0 ( -17.76 by residue)
QMean score : -0.301
|
|
|