Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKIISISETPNHNTMKITLSESREGMTSDTYTKVDDSQPAFINDILKVEGVKSIFHVMDFISVDKENDANWETVLPKVEAVFE
2O11 Chain:A ((245-273))
-------------------------------------DSQLAAAVMGIQAIKGVEIGDGFQTARRR-----------------
General information:
TITO was launched using:
RESULT:
Template:
2O11.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -10504 for 117 contacts (-89.8/contact) +
2D Compatibility (PS) -2762 + (NN) 1795 + (LL) 3372
1D Compatibility (HY) -400 + (ID) 100
Total energy: -8599.0 ( -73.50 by residue)
QMean score : 0.404
(partial model without unconserved sides chains):
PDB file :
Tito_2O11.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2O11-query.scw
PDB file :
Tito_Scwrl_2O11.pdb
: