Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMMSRLNSVVIKLWLTIILIVTTVLILLSIALITFMQYYFTQETENAIREDARRISSLVEQSHNKEEAIKYSQTLIENPGGLMIINNKHRQSTASLSNIKKQMLNEVVNNDHFDDVFDKGKSVTRNVTIKEKGSSQTYILLGYPTKAQKNSHSKYSGVFIYKDLKSIEDTNNAITIITIITAVIFLTITTVFAFFLSSRITKPLRRLRDQATRVSEGDYSYKPSVTTKDEIGQLSQAFNQMSTEIEEHVDALSTSKNIRDSLINSMVEGVLGINESRQIILSNKMANDIMDNIDEDAKAFLLRQIEDTFKSKQTEMRDLEMNARFFVVTTSYIDKIEQGGKSGVVVTVRDMTNEHNLDQMKKDFIANVSHELRTPISLLQGYTESIVDGIVTEPDEIKESLAVVLDESKRLNRLVNELLNVARMDAEGLSVNKEV---QPIAALLDKMKIKYRQQADDLGLNMTFNYCKKRVWSY-DMDRMDQVLTNLIDNASRYTKPGDEIAITCDENESEDILYIKDTGTGIAPEHLQQVFDRFYKVDAARTRGKQGTGLGLFICKMIIEEHGGSIDVKSELGKGTTFIIKLPKPE
4CB0 Chain:A ((80-293))-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------QQRLLSDISHELRTPLTRLQLGTALLR----RRSGESKE-LERIETEAQRLDSMINDLLVMSRNQQKNALVSETIKANQLWSEVLDNAAF----EAEQMGKSLTVNFPPGPWPLYGNPNALESALENIVRNALRYSHTKIEVGFAVDKDGI--TITVDDDGPGVSPEDREQIFRPFYRTDEARDRESGGTGLGLAIVETAIQQHRGWVKAEDSPLGGLRLVIWLP---


General information:
TITO was launched using:
RESULT:

Template: 4CB0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -57015 for 1505 contacts (-37.9/contact) +
2D Compatibility (PS) -22882 + (NN) -10339 + (LL) 28320
1D Compatibility (HY) -11600 + (ID) 3250
Total energy: -76766.0 ( -51.01 by residue)
QMean score : 0.506

(partial model without unconserved sides chains):
PDB file : Tito_4CB0.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4CB0-query.scw
PDB file : Tito_Scwrl_4CB0.pdb: