Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTNLPMNKLI---DEVNNELSVAINKSVMDTQLEESMLYSLNAGGKRIRPVLLLLTLDSLNTEYELGVKSAIALEMIHTYSLIHDDLPAMDNDDYRRGKLTNHKVYGEWTAILAGDALLTKAFELISS--DDRLTDEVKIKVLQRLSIASGHVGMVGGQMLDMQSEG---QPIDLETLEMIHKTKTGALLTFAVMSAADIANVDDATKEHLESYSYHLGMMFQIKDDLLDCYGDEAKLGKKVGSDLENNKSTYVSLLGKDGAEDKLTYHRDAAVDELTQIDEQFNTKHLLEIVDLFYSRDH |
| 2J1P Chain:A ((13-239)) | ----PISYIIRKADSVNKALDSAVPLR-EPLKIHEAMRYSLLAGGKRVRPVLCIAACELVGGEESLAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVYGEDVAVLAGDALLSFAFEHLASATSSEVSPARVVRAVGELAKAIGTEGLVAGQVVDIS---LDLNNVGLEHLKFIHLHKTAALLEASAVLGGIIGGGSDEEIERLRKFARCIGLLFQVVDDILD----------------------------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2J1P.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -65021 for 1716 contacts (-37.9/contact) +
2D Compatibility (PS) -23497 + (NN) -16748 + (LL) 4432
1D Compatibility (HY) -19200 + (ID) 4800
Total energy: -124834.0 ( -72.75 by residue)
QMean score : 0.462
|
|
|