Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLTGKQKRYLRSLAHNIDPIFQIGKGGINENMIKQIDDTLENRELIKVHVLQNNFDDKKELAETLSEATRSELVQVIGSMIVIYRESKENKEIELP
1NH2 Chain:B ((26-43))
------------------------NAGIDEQTLQDLKNIWQK------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1NH2.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -2062 for 62 contacts (-33.3/contact) +
2D Compatibility (PS) -1983 + (NN) -556 + (LL) 6596
1D Compatibility (HY) -1200 + (ID) 150
Total energy: 645.0 ( 10.40 by residue)
QMean score : 0.715
(partial model without unconserved sides chains):
PDB file :
Tito_1NH2.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1NH2-query.scw
PDB file :
Tito_Scwrl_1NH2.pdb
: