Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MFKDFFNRTKKKKYLTVQDSKNNDVPAGIMTKCPKCKKIMYTKELAENLNVCFNCDHHIALTAYKRIEAISDEGSFTEFDKGMTSANPLDFPSYLEKIEKDQQKTGLKEAVVTGTAQLDGMKFGVAVMDSRFRMGSMGSVIGEKICRIIDYCTENRLPFILFSASGGARMQEGIISLMQMGKTSVSLKRHSDAGLLYISYLTHPTTGGVSASFASVGDINLSEPKALIGFA-GRRVIEQTINEKLPDDFQTAEFLLEHGQLDKVVHRNDMRQTLSEILKIHQEVTK |
1X0U Chain:A ((41-234)) | ------------------------------------------------------------LTARERLALLFDDGKFNEI---MTFAT-----TRATEFGLDKQRF-YGDGVVTGWGKVDGRTVFAYAQDFTVLGGSLGETHANKIVRAYELALKVGAPVVGINDSGGARIQEGALSLEGYGAV-FKMNVMASGVIPQITIMAGPAAGGAVYSPALTDFIIMIKGDAYYMFVTGPEITKVVLGEEV--SFQDLGGAVVHATKSGVVH-------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1X0U.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -77644 for 1604 contacts (-48.4/contact) +
2D Compatibility (PS) -20290 + (NN) -2652 + (LL) 5124
1D Compatibility (HY) -7200 + (ID) 2750
Total energy: -105412.0 ( -65.72 by residue)
QMean score : 0.386
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