Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAVNLYDYANQLEQALRESEEYKAIKEAFANVKANEESKKL------FDEFRETQINFQQKQMQGEEIAEEDLQKAQEQAQAIEKDENISALMNAEQKMSQVFQEINQIIVKPLDEIYAD
4UVB Chain:A ((469-550))
--VNLKEKIKELHQQYKEASEVKPPRDITAEFLVKSKHRDLTALCKEYDELAETQGKLEEKLQELEANPPSDVYLSSRDRQILD------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
4UVB.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 14252 for 340 contacts (41.9/contact) +
2D Compatibility (PS) -8329 + (NN) -4459 + (LL) 3604
1D Compatibility (HY) -2000 + (ID) 950
Total energy: 2118.0 ( 6.23 by residue)
QMean score : 0.391
(partial model without unconserved sides chains):
PDB file :
Tito_4UVB.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4UVB-query.scw
PDB file :
Tito_Scwrl_4UVB.pdb
: