Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKFFFIGLLVFVVFFTAATIIWFSYDKNKYGTKQYDKTFKDDAFDNVSINLDSTELRIKRGNQFRVKYDGDNDILINIVDKTLKISDKRSKTRGYAIDMNPFHENKKTLTIEMPDKMIKRLNLSSGAGSVRISDVDLENTSIQSINGEVVIK-NSNLDALDSKTNN--SSTYISKSNIKNSNIKVVIGTLQIDKSQIKQSIFLNDHG--------DIEFKNMPSKVDAKASTKQGDIRFKYDSKPEDTILKLNPGTGDSVVKNKTFTNGKVGKSDNVLEFYTIDGNIKVE |
| 4V29 Chain:A ((13-177)) | -----------------------------------------------MDDLLGLLRIRIKRGVNLAVRDISSSDPYV-----VVKMGKQKLKTRVINKDVNPEWNEDLTLSVTDSNL------------TVLLTVYDHDMFSKDDKMGDAEFEIKPYIEALRMQLDGLPSGTIVTTVKPSRRNCLAEESRVTWVDGKLVQDLVLRLRHVECGEVEAQLQWIDLPGSKGL-------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4V29.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 18826 for 1084 contacts (17.4/contact) +
2D Compatibility (PS) -16337 + (NN) -1615 + (LL) 6792
1D Compatibility (HY) -6400 + (ID) 1450
Total energy: -184.0 ( -0.17 by residue)
QMean score : 0.184
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