Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKTLKELRTDYGLTQKELGDLFKVSSRTIQNMEKDSTNIKDSLLSKYMSAFNVKYDDIFLGNEYENFVFTNDKKKSIILAFKEKQTS
2LYS Chain:A ((6-61))
---LKLIREKKKISQSELAALLEVSRQTINGIEKNKYNPSLQLALKIAYYLNTPLEDIF----------------------------
General information:
TITO was launched using:
RESULT:
Template:
2LYS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -27130 for 338 contacts (-80.3/contact) +
2D Compatibility (PS) -5650 + (NN) 690 + (LL) 2220
1D Compatibility (HY) -4000 + (ID) 1000
Total energy: -34870.0 ( -103.17 by residue)
QMean score : 0.821
(partial model without unconserved sides chains):
PDB file :
Tito_2LYS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2LYS-query.scw
PDB file :
Tito_Scwrl_2LYS.pdb
: