Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNYSSRQQPDKHWLRKVDWVLVATIAVLAIFSVLLINSAMGGGQYSANFGIRQIFYYILGAIFAGIIMFISPKKIKHYTYLLYFLICLLLIGLLVIPESPITPIINGAKSWYTFGPISIQPSEFMKIILILALARVVSRHNQFTFNKSFQSDLLLFFKIIGVSLVPSILILLQNDLGTTLVLAAIIAGVMLVSGITWRILAPIFITGIVGAMTVILGILYAPALIENLLGVQLYQMGRINSWLDPYTYSSGDGYHLTESLKAIGSGQLLGKGYNHGEVY-IPENHTDFIFSVIGEELGFIGSVILILIFLFLIFHLIRLAAKIEDQFNKIFIVGFVTLLVFHILQNIGMTIQLLPITGIPLPFISYGGSALWSMMTGIGIVLSIYYHEPKRYVDLYHPKSN |
| 4HTC Chain:I ((1-65)) | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ITYTDCTESGQNLCL--CEGSNVCGKGNKCILGGNQCVTGEGTPKPESHNNGDFEEIPEEYLQ------------------------------------------------------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4HTC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -10329 for 350 contacts (-29.5/contact) +
2D Compatibility (PS) -6262 + (NN) -674 + (LL) 30100
1D Compatibility (HY) 2400 + (ID) 550
Total energy: 14685.0 ( 41.96 by residue)
QMean score : -0.104
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