Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKTFKAVRFQIVNEHGRIIEYELEDGVIINKEESGTGWLLEIVISNEHYETFKEYQDNEQLLDIRVVITRPANDPALFESTVKSIKNFK---TTMSIVFECHIYTLRQQYAESLLEQLIDDGLSGEELKKSFNRMMQSKPKLKDEKLEE |
2NWV Chain:A ((29-100)) | ------------------------------------------------------------NYETCLVFDENHDNYLWLAVDWQGSKRIKYTYVHIRIK-NEKIYIEEDYTEEGIATELMRLGVTNNDIVLAFH---------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2NWV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -454 for 378 contacts (-1.2/contact) +
2D Compatibility (PS) -6861 + (NN) 2209 + (LL) 6152
1D Compatibility (HY) -1600 + (ID) 400
Total energy: -954.0 ( -2.52 by residue)
QMean score : 0.049
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