Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNLIAAAIAIGLSALGAGIGNGLIVSRTVEGVARQPEARGQLMGIMFIGVGLVEALPIIGVVIAFMTFAG
1L6T Chain:A ((11-68))
---MAAAVMMGLAAIGDAIGIGILGGKFLEGAARQPDLIPLLRTQFFIVMGLVNAIPMIAV---------
General information:
TITO was launched using:
RESULT:
Template:
1L6T.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -30804 for 337 contacts (-91.4/contact) +
2D Compatibility (PS) -5752 + (NN) -156 + (LL) 1340
1D Compatibility (HY) -6400 + (ID) 1300
Total energy: -43072.0 ( -127.81 by residue)
QMean score : 0.150
(partial model without unconserved sides chains):
PDB file :
Tito_1L6T.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1L6T-query.scw
PDB file :
Tito_Scwrl_1L6T.pdb
: