Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTKYKIDFSKGLVPAILQDNQTKQVLMLGYMNQEAFDKTIEDGVVCFYSRSKQRLWTKGETSGHTQLVKDIHVDCDNDTILIDVIPNGPTCHTGSQSCFNTEVPFSVQTLAQTVQDSAQSNNEKSYTKYLLTEGIEKITKKYGEEAFEVVIEAI---KGDKKAFVSEVADELYHLFVLMHALGVDFSEIEAELARRHHKRNNFKGERQNIEQW |
2F9A Chain:A ((326-446)) | ------------------------------------------------------MYTASLYAAFASLVHNKHSDLAGKRVVMFSYGSGSTATMFSLRLCENQSPFSLSNIASVMDVGGKLKARHEYAPEKFVETMKLMEHRYGAKEFVTSKEGILDLLAPGTYYLKEV-DSLYRRF------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2F9A.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -8075 for 584 contacts (-13.8/contact) +
2D Compatibility (PS) -12244 + (NN) 2492 + (LL) 7324
1D Compatibility (HY) -6800 + (ID) 1250
Total energy: -18553.0 ( -31.77 by residue)
QMean score : 0.189
|
|
|