Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLTKQSQDFLEKLRVELLFRGKTEAEVEELLEELEDHLTMAEKNNEDTSSIINTPIKSMADQLSPEISLT-TGLYKYITLYFSFILAVIIIPRFLDLGTFDVTIAFLLYIASIVILGVV--IGMLILRNTLVRFGDQKITYVINVTYGIVVFLWMIFGGLIIKKYPIYSFFELSDKQSFIVGLVLLIALIVICILIKQKIYALIVLVISLPSLIARIAAIFSKEPDTFNLVSVSILIILNIAFIIYTFVNFRKLKKED |
2DHH Chain:A ((328-420)) | ----------------------------------------------DTTPFVKISIHEVVKTLVEAIILVFLVMYLFLQNFRATLIPTIAVPVVL-LGTFAVLAAFGFSINTLTMFGMVLAIGLLV------------------------------------------------------------------------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 2DHH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -61395 for 420 contacts (-146.2/contact) +
2D Compatibility (PS) -7445 + (NN) 4578 + (LL) 18204
1D Compatibility (HY) -9600 + (ID) 1150
Total energy: -56808.0 ( -135.26 by residue)
QMean score : 0.235
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