Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKKLIFLIVIALVLSACNSNSSHAKELND----LEKKYNAHIGVYALDTKSGKEVKFNSDKRFAYASTSKAINSAILLEQVPYNKLNKKVHINKDDIVAYSPILEKYVGKDITLKELIEASMTYSDNTANNKIIKEIGGIKKVKQRLKELGDKVTNPVRYEIELNYYSPKSKKDTSTPAAFGKTLNKLIANGKLSKKNKNFLLDLMFNNKNGDTLIKDGVPKDYKVADKSGQAITYASRNDVAFVYPKGQSEPIVLVIFTNKDNKSDKPNDKLISETAKSVMKEF |
1W7F Chain:A ((48-300)) | ----------------------------DDFAKLEEQFDAKLGIFALDTGTNRTVTYRPDERFAFASTIKALTVGVLLQQKSIEDLNQRITYTRDDLVNYNPITEKHVDTGMTLKELADASLRYSDNTAQNLILKQIGGPESLKKELRKIGDEVTNPERFEPELNEVNPGETQDTSTARALATSLQAFALEDKLPSEKRELLIDWMKRNTTGDALIRAGVPEGWEVADKTG-AGSYGTRNDIAIIWPP-KGDPVVLAVLSSRDKKDAKYDDKLIAEATKVVVK-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1W7F.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -37868 for 2248 contacts (-16.8/contact) +
2D Compatibility (PS) -27031 + (NN) -12022 + (LL) 2876
1D Compatibility (HY) -21600 + (ID) 5550
Total energy: -101195.0 ( -45.02 by residue)
QMean score : 0.805
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