Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MRALETIATLREYRKSLKESVGFVPTMGALHRGHQSLIERSLK-ENSHTIVSVFVNPTQFGANEDFSAYPRPLEKDLALCEKSGVNAVFAPKIGEMYPYEAKQRLKLYAPAFLSHSLEGAVRKGHFDGVVQVVLRLFHLTNPTRAYFGKKDAQQLLIIQHLVQDLLLDIEIAPCEIVRDSDNLALSSRNVCLNATERKQALAIPKALEKIQQAIDRGEKACEKLKKLGLEILKNLEVDYLECCNHKLEPLKTIEPANTL--VLVAARVGKTRLLDNLWV |
3IME Chain:A ((35-286)) | --------------------VMLVPTMGALHEGHLALVRAAKRVPGSVVVVSIFVNPMQFGAGGDLDAYPRTPDDDLAQLRAEGVEIAFTPTTAAMYPDGLRTTVQ---PGPLAAELEGGPRPTHFAGVLTVVLKLLQIVRPDRVFFGEKDYQQLVLIRQLVADFNLDVAVVGVPTVREADGLAMSSRNRYLDPAQRAAAVALSAALTAAAHAATAGAQAALDAARAVLDAAPGVAVDYLELRDIGLG--------NGSGRLLVAARLGTTRLLDNIAI |
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General information:
TITO was launched using:
| RESULT:
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Template: 3IME.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -133176 for 1961 contacts (-67.9/contact) +
2D Compatibility (PS) -26304 + (NN) -9092 + (LL) 2984
1D Compatibility (HY) -19200 + (ID) 5250
Total energy: -190038.0 ( -96.91 by residue)
QMean score : 0.476
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