Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMSAHFLKIVFLVGMCVSSLFAEGLEGFFNALEAQLKSPIAKGILMVIFIGIAIYVWRNLDRWKEILFTILGVVFGIFLFFKAPSLANWFMGVF
2JJ1 Chain:D ((16-43))------RIVAVIGAVVDVQFDEGLPPILNALEVQGRETRLVLEVAQHLGESTVRTIAMDGTEGLVRGQKVLDSGAPIRIPVGPETLGRIMNVI


General information:
TITO was launched using:
RESULT:

Template: 2JJ1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		3D Compatibility (PKB) -6204 for 96 contacts (-64.6/contact) +
2D Compatibility (PS) -2519 + (NN) 4297 + (LL) 676
1D Compatibility (HY) -3200 + (ID) 650
Total energy: -7600.0 ( -79.17 by residue)
QMean score : -0.124

(partial model without unconserved sides chains):
PDB file : Tito_2JJ1.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2JJ1-query.scw
PDB file : Tito_Scwrl_2JJ1.pdb: