Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLLNYDFLELVDDEPQRNTSLTSAIDKALADKKLARQNKPRVRVKDNLSLSETLDAYGRELSRLKNQQETIKASTIESSNLNSIVNKIKSGLPFGTISAFRPFKEAFIKDFTQDERELLVEAYKSGYKASQLDKVSKKWRDDPNPIDASYLADAFLREYR-------TIALKLSTALGKPFVNKFLNPKSETTMKDFMSSEKFVKKYRFTQKDNIKRTQELKSLLDQKRHFLGYLQVTGYWKDKLNDPLLPSKEVSFFVFQNEPSNSFNLKDQLLDLAKYFNQEAICYCQNAETGKVDLVLATEKDFGKVDMTFTGITFTIPLTQSITRLHNKVYTFFDKQGKDNYGVFFDELSTTKLKAMSIPKIADEFYRHLENRVKSFIRARQYHGSPRTFDADDIEKYELQAIKRLDLQRCAKSKSFKASYNHNIKINNLANALRQGKEVSKTLITKVLANTIDTDAGYCFISDLATQLGNISPRLSKSIVTAIEQAEGIRLLYALIDKVSYNSLHNTLNFIFDIDNPMSDQSLNELVVEVPREALKNVKLPQIKNELTSQIFDGAYQFRGNDYQFKG |
4D10 Chain:C ((3-403)) | ---------------SALEQFVNSVRQLSAQGQMTQLCELINK--SGELLAKNLSHLDTVLGALDVQEHSLGVLAVLFVKF-----------SMPSVPDFETLFSQVQLFISTCNGEHI--RYATDTFAGLCHQLTNALVERKQPLRGIGILKQAIDKMQMNTNQLTSIHADLCQLCLLAKCFKPALPYLDVDMMDICK----------------------ENGAYDAKHFLCYYYYGGMIYTGLKN---------------------------FERALYFYEQAI---TTPAMAVSHIMLESYKKYILVSLILLGKVQQLPKYTS--------------------------------------QIVGRFIKPL---------SNAYHELAQVYSTNNPSELRNLVNKH--------SETFTRDNNMG-LVKQCLSSLYKKNIQRLTKTFLTLS-----------LQDMASRVQLSGPQEAEKYVLHMIEDGEIF--------ASINQKDGMVSFH---DNP-EKYNNPAMLHNIDQEMLKCIELDERLKAMDQEITVNPQF---------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4D10.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 62511 for 2869 contacts (21.8/contact) +
2D Compatibility (PS) -41075 + (NN) -7884 + (LL) 11516
1D Compatibility (HY) -18400 + (ID) 3100
Total energy: 3568.0 ( 1.24 by residue)
QMean score : 0.183
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