Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MMFHKALITFIVLWFFLNGLGAYDFKHCQAFFKKASLQKGGVALKELPKGVYLYYSKTYPKHAKVIKSDPFIGLYLLQSA--PSEYVYTLRDLDKDALIRPMASIGAN-Q----ATEARLLVGQKGYD---RYAQIS---QKT-QKNGVISNICYQMLGLGVGGN-------------GF-IE----TKFIKRFLNQQEPYYGDIGVRLEER------------HKRLVVAQFDPFFPK--NPFLKNDEILAINDYKIHSLAEFEWVVSNLSYQSLAKVKIKRNHQIKEVTLKVNKRYGGFLLKDTFLERYGIALDERFIITKIGAHLPKGLDFLKLGDRILWVNHKSVSFNPKALREALSTPKIELLVWRQGFEFYIKVR |
| 3STJ Chain:A ((93-334)) | -----------------------------------------------------QLNDGREFDAKLIGSDDQSDIALLQIQNPSKLTQIAIADSDKLRVGDFAVAVGNPFGLGQTATSGIVSALGRSGLNLEGLENFIQTDASINRGNS--GGALLNLNGELIGINTAILAPGGGSVGIGFAIPSNMARTLAQQLIDFGEIKRGLLGIKGTEMSADIAKAFNLDVQRGAFVSEVLPGSGSAKAGVKAGDIITSLNGKPLNSFAELRSRIATTEPGTKVKLGLLRNGKPLEVEVTLDTS------------------------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3STJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -31823 for 1406 contacts (-22.6/contact) +
2D Compatibility (PS) -20520 + (NN) -566 + (LL) 11388
1D Compatibility (HY) -2800 + (ID) 1900
Total energy: -46221.0 ( -32.87 by residue)
QMean score : 0.276
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