Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKEKPFNSEQMAFLEELLSHQEKHLESKLSGFSVNDLDMQSVFRLERNRLKIAYRLLGLMSFIALVLAIVLISILPLQKTEHHFVDFLNQDKHYAIIQRADKSISSNEALARSLIGAYVLNRESINRIDDKSRYELVRLQSSSKVWQRFEDLIKAQNSIYVQSHLEREVHIVNIAIYQQDNNPIASVSIAAKLLNENKLVYEKRYKIVLSYLFDTPDFDYASMPKNPTGFKITRYSITEIAPTNRND |
| 2GQ9 Chain:A ((245-285)) | -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DADPILTYTAAAALLNKHRIVY-----------LHIAEVDWDDAPDTPVSFKRALREAYQGVLIYAGR |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2GQ9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -2178 for 167 contacts (-13.0/contact) +
2D Compatibility (PS) -4580 + (NN) -5024 + (LL) 17520
1D Compatibility (HY) -3600 + (ID) 750
Total energy: 1388.0 ( 8.31 by residue)
QMean score : 0.586
|
|
|